As a side note, the USB host on the Kronos only has one-way MIDI in.... no USB MIDI out, no USB MIDI thru.
Odd that it affects the Minitaur, which is only attached via a MIDI THRU. Rev 2 has MIDI USB + DIN for the output option.
My Rev2 is in multi-mode, and often it's the B layer that gets stuck notes while srolling presets while sequencer is playing that stuck notes happen. I'll try to recreate it predictably then report it as a bug to Sequential.